- #1
bowlbase
- 146
- 2
Homework Statement
I am suppose to calculate the relative entropy between two sets of data:
Base set
Set 1:
A C G T
0 0 0 10
0 0 0 10
0 0 10 0
0 10 0 0
10 0 0 0
* * * * //Randomized
0 0 0 10
0 10 0 0
Set 2:
A C G T
0 0 0 10
0 0 0 10
0 0 10 0
0 10 0 0
10 0 0 0
1 4 1 4
0 0 0 10
0 10 0 0These are frequency of occurrence matrices. Set 2 is a matrix created after a variable number of characters is mutated. In this case only 1 character in the 3rd from bottom row was mutated. Thats why this row has no 10s. Every other position didn't mutate so has the correct number of occurrences as compared to set 1. I have 70 other sets of this data with various number of mutations and lengths.
I am trying to read about this online but the information is convoluted and often seems to actively avoid defining variables. Can someone walk me through the process?