Calculating the interaction potential between 2 molecules

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In summary, calculating the interaction potential between two molecules involves determining the energy associated with their intermolecular forces. This process typically includes assessing factors such as electrostatic interactions, van der Waals forces, and hydrogen bonding. Various computational methods, including molecular mechanics and quantum mechanics, are employed to model these interactions accurately, allowing researchers to predict binding affinities and molecular behavior in different environments. Understanding these potentials is crucial for applications in drug design, materials science, and biochemistry.
  • #1
kelly0303
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Hello! I am trying to understand how to calculate the interaction potential between 2 molecules and I am a bit unsure how to proceed. For reference, I am sharing this paper, in particular Fig. 1b. They add some microwave fields which complicates things, but I am interested in reproducing the potential curves without the coupling to microwaves (dashed lines in that figure). The potential responsible for these curves is the dipole-dipole interaction one, which is given by:

$$\frac{\vec{d_1}\cdot\vec{d_2}-3(\hat{R}\cdot\vec{d_1})(\hat{R}\cdot\vec{d_2})}{R^3}$$

where ##d_{1,2}## are the dipole moment operators for the 2 molecules and R is the distance vector between them. Using the basis ##|J,M_J>##, where J is the rotational quantum number of the molecule and ##M_J## is the projection along some lab frame axis (in this case they apply a magnetic field). In the end, in Fig. 1b, they show the potential for the interaction of molecules in the ##|0,0>## state each. But I am not sure why is this not identically zero. When doing the math you end up with ##<0,0|d_1|0,0>##, which is zero. In general, I am not sure how we can have dipole-dipole interaction, given that the molecules are not polarized (they apply no electric field and now I am interested in the case where the microwaves are not applied). What am I doing wrong?
 
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  • #2
d_1 is intrinsic dipole moment which one of the two-atom molecule pair has. Why do you think its expectation value is zero , not constant ?
 
  • #3
anuttarasammyak said:
d_1 is intrinsic dipole moment which one of the two-atom molecule pair has. Why do you think its expectation value is zero , not constant ?
But the dipole moment in the lab frame (where the 2 molecules interact) is zero. This follows from the fact that the ##|0,0>## wavefunction has definite parity, while the ##d_1## is a parity odd operator.
 
  • #4
I get your point. If |0,0> shows 1s like homobeneous wavefuction, aveage dipole moment is zero.
However, the paper says

---------
However, the direct effective DDI alone, which
is ∝ −d2 eff(1 − 3 cos2 θ)/r3
, cannot provide the 3D repulsive barrier between two molecules as it is attractive for collisional angles θ (w.r.t the quantization axis along the vertical direction) large than 54.7◦
----------

where I would add
[tex] arccos(1/\sqrt{3})= 54.74 \ degree [/tex]
The authors seem to calculate DDI energy not using |0.0> states. I just observe it and do not have a point of concilliation with your question.
 
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