- #1
WillCawdell
- 2
- 2
Hello!
I'm trying to model an interaction between ligands and a heme group using FMO in Gamess.
I've tried to make HMOs for the FMOBND section of the input file (using an Fe-F complex), the HMOs are shown below:
STO-3G 19 5
0 1 0.992624, 0.019366, 0.000000, 0.000000,-0.000001,-0.014838, 0.000000,
0.000000, 0.000004, 0.005535, 0.005534, 0.005534, 0.000000, 0.000000,
0.000000,-0.000595, 0.000000, 0.000000,-0.000029
1 0 0.420492,-1.033033, 0.000000, 0.000000,-0.000111,-0.314157, 0.000000,
0.000000, 0.000062, 0.110327, 0.111004, 0.109981,-0.000339, 0.000000,
0.000000,-0.010802, 0.000000, 0.000000,-0.000514
0 1 -0.000040, 0.000094, 0.000000, 0.000000,-0.990859, 0.000170, 0.000000,
0.000000,-0.026700,-0.000085,-0.000086,-0.000094, 0.000001, 0.000000,
0.000000, 0.000139, 0.000000, 0.000000, 0.002284
0 1 0.000000, 0.000000, 0.928325, 0.346200, 0.000000, 0.000000, 0.025225,
0.009407, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000008,
0.000003, 0.000000,-0.001955,-0.000729, 0.000000
0 1 0.000000, 0.000000,-0.346473, 0.929057, 0.000000, 0.000000,-0.008635,
0.023155, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000,-0.000003,
0.000009, 0.000000, 0.000689,-0.001848, 0.000000
These HMOs work to a certain extent, allowing monomer calculations on the heme group, cysteine donor and my ligand donor to converge, however the value they converge to is oscillating between 2 points thus never converging according to Gamess. So the calculation cannot proceed to the dimer stage.
Does anyone have any ideas how to make my convergence better? U currently use DIIS as a start an initial convergence mode then switch to SOSCF to fine tune the convergence value
Thannks a lot in advance!
I'm trying to model an interaction between ligands and a heme group using FMO in Gamess.
I've tried to make HMOs for the FMOBND section of the input file (using an Fe-F complex), the HMOs are shown below:
STO-3G 19 5
0 1 0.992624, 0.019366, 0.000000, 0.000000,-0.000001,-0.014838, 0.000000,
0.000000, 0.000004, 0.005535, 0.005534, 0.005534, 0.000000, 0.000000,
0.000000,-0.000595, 0.000000, 0.000000,-0.000029
1 0 0.420492,-1.033033, 0.000000, 0.000000,-0.000111,-0.314157, 0.000000,
0.000000, 0.000062, 0.110327, 0.111004, 0.109981,-0.000339, 0.000000,
0.000000,-0.010802, 0.000000, 0.000000,-0.000514
0 1 -0.000040, 0.000094, 0.000000, 0.000000,-0.990859, 0.000170, 0.000000,
0.000000,-0.026700,-0.000085,-0.000086,-0.000094, 0.000001, 0.000000,
0.000000, 0.000139, 0.000000, 0.000000, 0.002284
0 1 0.000000, 0.000000, 0.928325, 0.346200, 0.000000, 0.000000, 0.025225,
0.009407, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000, 0.000008,
0.000003, 0.000000,-0.001955,-0.000729, 0.000000
0 1 0.000000, 0.000000,-0.346473, 0.929057, 0.000000, 0.000000,-0.008635,
0.023155, 0.000000, 0.000000, 0.000000, 0.000000, 0.000000,-0.000003,
0.000009, 0.000000, 0.000689,-0.001848, 0.000000
These HMOs work to a certain extent, allowing monomer calculations on the heme group, cysteine donor and my ligand donor to converge, however the value they converge to is oscillating between 2 points thus never converging according to Gamess. So the calculation cannot proceed to the dimer stage.
Does anyone have any ideas how to make my convergence better? U currently use DIIS as a start an initial convergence mode then switch to SOSCF to fine tune the convergence value
Thannks a lot in advance!