I'm not familiar with your notation, and it's also good to write out the arguments. First of all you have
$$\hat{H}=\int_{\mathbb{R}} \mathrm{d} x \hat{\varphi}^*(t,x) \left (-\frac{1}{2} \Delta +V(x) \right) \hat{\varphi}(t,x).$$
Now ##\hat{H}## is not explicitly time dependent and that implies that it is conserved:
$$\frac{\mathrm{d}}{\mathrm{d} t} \hat{H}=[\hat{H},\hat{H}]+\partial_t \hat{H}=0.$$
That implies that you can use any ##t## in evaluating ##\hat{H}## since ##\hat{H}## doesn't depend on it. Now you have
$$[\hat{H},\hat{\varphi}(t,x)]=\int_{\mathbb{R}} \mathrm{d} x' \left [\hat{\varphi}^*(t,x') \left (-\frac{1}{2} \Delta' +V(x') \right) \hat{\varphi}(t,x'),\hat {\varphi}(t,x) \right ].$$
Now you can just use the equal-time commutator relations given in #1 to show (2.37). You also need the general formula
$$[\hat{A},\hat{B} \hat{C}]=[\hat{A},\hat{C}] \hat{B}+\hat{C} [\hat{A},\hat{B}],$$
valid for any three operators ##\hat{A}##, ##\hat{B}##, and ##\hat{C}##.
It is allowed to use ##t## in the integral for ##\hat{H}## as the time argument of the fields since ##\hat{H}## doesn't depend on time as argued above, and that's why you can use the equal-time commutation relations to evaluate this commutator.