Molecule Definition and 462 Threads

  1. A

    Calculating ESP charges for a molecule fragment using Gaussian

    Hi there, I'm trying to reconstruct the ESP charges that have been determined in a paper using a Gaussian-like quantum chemistry program. While I understand the basic notion of the iterative procedures to approximate the wavefunctions etc., I'm not a chemist and so I'm having problems with...
  2. icystrike

    Chemistry NH3 molecule did not use sp3 hybridized orbitals

    Homework Statement 20. If the central N in the NH3 molecule did not use sp3 hybridized orbitals. What would be the expected angle in NH3? Homework Equations The Attempt at a Solution I should just consider 3 of the H: 1s^{1} bonding with the P_{x} , P_{y} , P_{z} respectively and the angle is...
  3. Oddbio

    Rotational energy of H2 molecule

    Homework Statement Consider the H2 molecule. The two nuclei (protons) have spin 1/2 and can therefore be in a total spin S=0 or an S=1 state. What is the orbital angular momentum of the two-nucleon system in the lowest energy state for the two values of the total spin? Homework Equations...
  4. C

    Average Force of Oxygen Molecule in Cubical Vessel

    Homework Statement ...Suppose an oxygen molecule (m=5.32E-26 kg) traveling at this speed (\nu_{rms}=484 m/s) bounces back and forth between opposite sides of a cubical vessel 0.10 m on a side. What is the average force the molecule exerts on one of the walls of the container? (Assume that the...
  5. T

    The average translational kinetic energy of nitrogen molecule

    1. The average translational kinetic energy of a nitrogen molecule at temperature is _____ check picture 2. 3. The Attempt at a Solution : since nitrogen is diatomic then it has 5 degrees of freedom and therefore the average kinetic energy wouldn't be 3/2kt it would...
  6. I

    Gas molecule and moving wall collision

    Homework Statement Gas is contained in an enclosure in which one of the walls is a plane of area A. The wall acts as a frictionless piston, moving with constant velocity u in the positive x-direction, thus increasing the volume V of gas enclosed. A gas molecule of mass m approaches the...
  7. K

    Normal frequencies of vibration of a molecule

    Hello, I am new in computational chemistry. I was calculating by "Moller Plesset Second Order perturbation theory -MP2-" (using GAMESS) molecular parameters of Cs3Cl2-. Among them i found two complex frequencies of vibration. My question is now, what is the physical meaning of those complex...
  8. T

    Positive charge of NAD+ molecule

    Why is the positive charge of the NAD+ molecule located on the nitrogen in the nicotinamide group? This nitrogen has 4 bonds attached to it, but nitrogen only has 3 holes in its valence shell, so wouldn't this make a negative charge on this nitrogen?
  9. W

    Can a Molecule Share 4 Bonded Electrons?

    I am wandering whether this can happen? When a molecule shares 4 pairs of bonded electons? Say like a C2 Molecule?? maybe. Could it happen or does it happen??
  10. H

    QM: Angular Momentum Matrices (Rotating Molecule)

    Homework Statement For l=1 the angular momentum components can be represented by the matrices: \hat{L_{x}} = \hbar \left[ \begin{array}{ccc} 0 & \sqrt{\frac{1}{2}} & 0 \\ \sqrt{\frac{1}{2}} & 0 & \sqrt{\frac{1}{2}} \\ 0 & \sqrt{\frac{1}{2}} & 0 \end{array} \right] \hat{L_{y}} =...
  11. J

    Chemistry Statistical thermo (diatomic molecule w/harmonic oscillator)

    How do you use the C_ij matrix to find the harmonic frequency (or frequencies) of a diatomic molecule, the OH (hydroxyl) radical? (I have no idea how to set it up for this.) This is from Feynmann's book on Statistical Mechanics...
  12. J

    Understanding Molecule Theory: Tips and Tricks for Hands-On Physics Enthusiasts

    Hi all. I love the fact that you have this forum! I need help with a problem of mine that has been lingering in the back of my mind for years. I would like to put it to rest. I am a backyard hands on kind a guy with regards to Physics. My background is in Mechanical Engineering but I have...
  13. S

    What happens when a co2 molecule absorbs an infra red photon?

    Its common knowledge that infra red radiation heats up an absorbing solid surface. That is,the em radiation energy is converted into translational KE of the particles of the solid. What happens in the case of an isolated CO2 molecules absorption? Can the EM energy be converted into increased...
  14. K

    Determine the effective spring constant of the molecule

    Homework Statement A molecule of DNA is 2.17 micrometers long. The ends of the molecule becom singly ionized: negative on one end, positive on the other. The helical molecule acts like a spring and compresses 1.00% upon becoming charged. Determine the effective spring constant of the molecule...
  15. A

    Simulating CO2 as a flexible molecule impossible? (MD)

    Hi there, i'm trying to do molecular dynamics simulations with CO2. However, I'm running into some problems, that I don't fully understand up to know. From a naive point of view, I would describe CO2 as a linear molecule consisting of 2 C-atoms and 1 O-atom. To simulate a flexible model...
  16. W

    Energy produced by oxygen molecule vibrating

    Homework Statement An oxygen molecule vibrates so that the distance between its intramolecular bonds changes from 1 Angstrom to 3 Angstrom. This change occurs 1000 times every second. If the average speed of the movement is 100 m/s, and the weight of the molecule is 10^-26 kg, how much...
  17. U

    Inter-atomic force in a Hydrogen molecule - finding spring stiffness

    Inter-atomic force in a Hydrogen molecule -- finding "spring" stiffness Homework Statement At about 2000 K the heat capacity (at constant volume =) increases to (7/2)k per molecule due to contributions from vibrational energy states. Use these observations to estimate the stiffness of the...
  18. I

    Find the number of units of the molecule in the river after n weeks

    Homework Statement A chemical plant produces pesticide that contains a molecule potentially harmful to people if the concentration is too high. The plant flushes out the tanks containing the pesticide once a week, and the discharge flows into the river. The molecule breaks down gradually in...
  19. H

    Quantum Mechanics on Diatomic Molecule: Info Sources

    Does anyone know where I can find information about using quantum mechanics on the diatomic molecule (E.g. Lectures on YouTube or just notes)? Thanks.
  20. W

    What makes a Molecule Polar? Dipole?

    Hi, 1st year chem guy here...I'm missing this idea. Is it all based upon Electronegativity? I can see why HBr or HCl and other 2 atom compounds would be polar. 2 atoms with different charges or even sizes creating an un-even pull. I'm guessing H2O is polar as the 4 remaining electrons on...
  21. C

    Molecule size of water and oxygen

    Which size of the molecule is bigger? Water or oxygen? Can someone state out the size unit of these molecules And, can I find a meterial to separate this 2 matter but let one of it pass through the other? (Osmosis effect) Really appreaciate who can help out here, thx
  22. S

    Mechanical Energy of Amonia Molecule

    Mechanical Energy of Amonia Molecule [SOLVED] Homework Statement The ammonia molecule has the tetrahedral structure shown in the figure (Intro 1 figure) . The three hydrogen atoms form a triangle in the xy-plane at z = 0. The nitrogen atom is the apex of the pyramid. The figure (Intro 2...
  23. M

    Homework Problem regarding speed of hydrogen molecule

    Homework Statement You place 83 moles of hydrogen gas in a balloon of volume 2.8 m3, and find the pressure to be 1.4 times atmospheric pressure. What is the typical speed of a hydrogen molecule? Homework Equations v=(sqrt)((3*Boltzmann Constant*T)/mhydrogen T=pv/nr The Attempt...
  24. G

    Potential-energy function of diatomic molecule

    Hi there all, I have this problem which I have issues with; there's some stuff I need to do in C and any help would be much appreciated. For V(o) = 36 i need to find the ground state energy and normalised ground state function using matrix methods. I am allowed to use Matlab to find the...
  25. S

    So confused with 5' to 3' end of DNA molecule

    Hello everyone, Quick questions. What do they mean by different polarities in anti parallel DNA strands. Are they referring to some chemical polarity or simply the fact they run in opposite directions. I'm confused with DNA replication. DNA polymerase can only synthesize DNA in 5' to 3'...
  26. A

    Perturbative Treatment on Diatomic Hydrogen Molecule

    Hello Everyone! I need help on this topic. Can anyone provide me some details on how to solve the problem? Thanks..
  27. M

    Why Do Molecules Absorb Photons at Combined Frequencies v1 + v2?

    Hello If a molecule has two specific vibrational modes (eg. symmetric and antisymmetric stretching in H2O), and they occur at different frequencies, v1 and v2, then why is the absorption band associated with a combination of these two modes labelled "v1 + v2"? My intuition is that the H2O can...
  28. M

    Partition function of rotating molecule

    Hello I am working through a textbook here, struggling to follow a mathematical step. We are deriving the partition function Q due to pure rotation of a system containing molecules with quantum rotation energy levels: E = h2J(J+1) / 8pi2I Where J is the rotational quantum number, J = 0,1,2...
  29. N

    What Does It Mean for a Molecule to Be in an 'Activated Form'?

    What exactly does it mean for a molecule to be in an 'activated form?' How exactly does this correspond to its energy levels? By this I mean how UDP-glucose is an activated form of glucose, ATP is an activated form of orthophosphate, and acetyl CoA is an activated form of acetate. (I pull...
  30. S

    What Speed Would an N2 Molecule Have with Photon Energy of Various Wavelengths?

    1. Homework Statement Consider a gas-phase N2 molecule. It's RMS speed is given by Vrms = (3kT/m)^(1/2) What speed would the gas molecule have if it had the same energy as a photon of the following wavelengths of IR, visible, UV and X-Ray electromagnetic radiation? lambda =...
  31. S

    Chemistry How Fast Would a Nitrogen Molecule Travel with Photon Energy?

    Homework Statement Consider a gas-phase N2 molecule. It's RMS speed is given by Vrms = (3kT/m)^(1/2) What speed would the gas molecule have if it had the same energy as a photon of the following wavelengths of IR, visible, UV and X-Ray electromagnetic radiation? lambda = 1.000E4nm...
  32. A

    Chemistry Size change in a paramagnetic molecule (oxygen) in a megnetic field?

    I know that placing a paramagnetic molecule inside a magnetic field will induce a magnetic force on the molecule from the unpaired electrons, but what will the effect be on the physical properties on the molecule (of any?) Specifically will the size of the molecule be changed? My understanding...
  33. A

    Effect of a magnetic field on the physical size of a paramagnetic molecule

    I know that placing a paramagnetic molecule inside a magnetic field will induce a magnetic force on the molecule from the unpaired electrons, but what will the effect be on the physical properties on the molecule (of any?) Specifically will the size of the molecule be changed? My understanding...
  34. B

    Chemistry True statements about the above molecule ?(AM I CORRECT?) ~ Chemistry

    Homework Statement Which of the following are true statements about the above molecule ? a) The bond between carbon and nitrogen should be the strongest bond in the molecule b) The C-C bond should be the strongest bond in the molecule c) The C=O bond is more polar than the C-C...
  35. I

    Calculating O2 Molecule Velocity at -50C

    Homework Statement Calculate Velocity of an oxygen molecule at height, where the temperature is -50C. O2 molecule: 5.4x10^-26 kg Homework Equations 1/2mC^2=3/2kT The Attempt at a Solution => 1/2 (5.4x10^-26) c^2 = 3/2 (1.38x10^-23) x -(50) => c2= 1.035x10^-21 =>c=3.21x10^-11 m/s...
  36. W

    Hydrogen molecule as harmonic oscillator

    Homework Statement The harmonic oscillator problem may be used to describe the vibrations of molecules. For example, the hydrogen molecule H2 is found to have equally spaced vibrational energy levels separated by 8.7 × 10-20 J. What value of the force constant of the spring would be needed to...
  37. I

    Probabilities of finding a molecule at a given speed

    Problem: What is the ratio of the probability of finding a molecule moving with the average speed to the probability of finding a molecule moving with three times the average speed? So I know I need to use the Maxwell Speed Distribution for this: D(v) dv = (m/(2(pi)(k)(T)))^(3/2) *...
  38. C

    Finding magnitude of torque on a molecule

    Homework Statement Molecules of carbon monoxide are permanent electric dipoles due to unequal sharing of electrons between the carbon and oxygen atoms. The figure shows the distance and charges. Suppose a carbon monoxide molecule with a horizontal axis is in a vertical electric field of...
  39. djeitnstine

    How Was a Single Molecule of Pentacene Pictured?

    The researchers focused on a single molecule of pentacene, which is commonly used in solar cells. The rectangular-shaped organic molecule is made up of 22 carbon atoms and 14 hydrogen atoms. In the image above the hexagonal shapes of the five carbon rings are clear and even the positions of...
  40. F

    A single pentacene molecule observed through an atomic force microscope

    awesome! i guess it won't be long now before people will be able to do this with their iPhones: http://www.dailymail.co.uk/sciencetech/article-1209726/Single-molecule-million-times-smaller-grain-sand-pictured-time.html
  41. Useful nucleus

    Why is there a discrepancy in the calculated dipole moment of a water monomer?

    a water monomer has HOH angle of 104.5 and OH length of 0.98 , partial charges are +0.4 on H and -0.8 on O. The reported electric dipole moment for this monomer is 1.86D. I tried to calculate it and got 2.3 D. The way I do it is by multiplying the distance between the center of the H-H and the...
  42. W

    Jahn-teller theorem and the CH_4 molecule

    is there any contradiction between the two?
  43. L

    Speed of an air molecule when transmitting sound of frequency f

    The speed of sound in the air is constant no matter what its frequency f is. Fine. But what is the speed of an air molecule which transmits that sound of frequency f? The higher the frequency, the higher the speed of the molecule, right? What is the equation which gives this velocity? (and a...
  44. B

    What Affects the RMS Speed Difference Between Helium Atoms and Molecules?

    Homework Statement Heat is added until the rms speed of a helium atom has increased 50%. Find new pressure. (Not all parameters given.) Homework Equations rms = (3kT/m)1/2 mass of molecule = mass of mole/NA Then, mass of helium molecule is 6.6x10-26kg The Attempt at a Solution...
  45. I

    What does a molecule having dipole moment signify?

    Can someone give me a clear picture of it's physical meaning? What does a molecule having dipole moment signify? All the explanations I've seen are very hazy.
  46. S

    What Is the RMS Speed of a Nitrogen Molecule at 35°C?

    Homework Statement Compute the rms speed of a nitrogen molecule of 35.0 celcius. Homework Equations V(rms) = sqrt((3RT)/M) The Attempt at a Solution I plugged in 8.31 for R and 308 K for T and 14.0 g/mol for M. I arrived at a solution of 23.4 m/s but this answer came back as...
  47. D

    Frequency of Oscillation of a Molecule

    Homework Statement Show that the frequency of oscillation, v, of a molecule is related to the form of the inter - atomic potential V(r) about the equilibrium separation, r =ro by the expression, v = (1/2pi).sqrt([d2V/dr2r=ro/(m)]) where m is the reduced mass Homework Equations None given...
  48. W

    Frequency to shatter a molecule

    How do you calculate the resonant frequency required to shatter a calcium or magnesium molecule?
  49. P

    Chemistry Solution check for Complex Molecule IUPAC Naming

    Homework Statement a) Given the IUPAC name to the chemical formulas: {\left[ {Ni{{\left( {N{H_3}} \right)}_6}} \right]^{2 + }} \left[ {CrC{l_3}{{\left( {N{H_3}} \right)}_3}} \right] {\left[ {Co{{\left( {N{O_2}} \right)}_6}} \right]^{3 - }} b) Give the metal oxidation state...
  50. L

    How to find out the effective cross area of a molecule in a monolayer film?

    hi guys, i need some help with the following questions relating to cross sectional area. thanks in advance! 1) when n-hexatriacontanoic acid, CH3(CH2)34COOH was placed in water, a complete monomolecular film was formed. if the length of a carbon-carbon single bond in the chain is 1.54...
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